Antonis Rokas: search on Z-Library

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1

The Origins of Multicellularity and the Early History of the Genetic Toolkit For Animal Development

Journal:

Annual Review of Genetics

Year:

2008

Language:

english

File:

PDF, 298 KB

english, 2008

2

Asgard archaea do not close the debate about the universal tree of life topology

Da Cunha, Violette, Gaia, Morgan, Nasir, Arshan, Forterre, Patrick, Rokas, Antonis

Journal:

Year:

2018

Language:

english

File:

PDF, 665 KB

english, 2018

3

Variation and selection on codon usage bias across an entire subphylum

Labella, Abigail L., Opulente, Dana A., Steenwyk, Jacob L., Hittinger, Chris Todd, Rokas, Antonis, Barsh, Gregory S.

Journal:

Year:

2019

Language:

english

File:

PDF, 6.26 MB

english, 2019

4

Toward a Fully Resolved Fungal Tree of Life

James, Timothy Y., Stajich, Jason E., Hittinger, Chris Todd, Rokas, Antonis

Journal:

Annual Review of Microbiology

Year:

2020

File:

PDF, 472 KB

2020

5

Animal mitochondrial DNA recombination revisited

Antonis Rokas, Emmanuel Ladoukakis, Eleftherios Zouros

Journal:

Trends in Ecology & Evolution

Year:

2003

Language:

english

File:

PDF, 232 KB

english, 2003

6

The diverse applications of RNA-seq for functional genomic studies in Aspergillus fumigatus

Rokas, Antonis, Gibbons, John G., Zhou, Xiaofan, Beauvais, Anne, Latgé, Jean-Paul

Journal:

Annals of the New York Academy of Sciences

Year:

2012

Language:

english

File:

PDF, 1012 KB

english, 2012

7

A genome-scale investigation of incongruence in Culicidae mosquitoes

Wang, Yuyu, Zhou, Xiaofan, Yang, Ding, Rokas, Antonis

Journal:

Genome Biology and Evolution

Year:

2015

Language:

english

File:

PDF, 1.43 MB

english, 2015

8

Contentious relationships in phylogenomic studies can be driven by a handful of genes

Shen, Xing-Xing, Hittinger, Chris Todd, Rokas, Antonis

Journal:

Nature Ecology & Evolution

Year:

2017

Language:

english

File:

PDF, 1.09 MB

english, 2017

9

A Global Co-expression Network Approach for Connecting Genes to Specialized Metabolic Pathways in Plants

Wisecaver, Jennifer H., Borowsky, Alexander T., Tzin, Vered, Jander, Georg, Kliebenstein, Daniel J., Rokas, Antonis

Journal:

Year:

2017

Language:

english

File:

PDF, 6.39 MB

english, 2017

10

Inverted formin 2 regulates intracellular trafficking, placentation, and pregnancy outcome

Lamm, Katherine Young Bezold, Johnson, Maddison L, Baker Phillips, Julie, Muntifering, Michael B, James, Jeanne M, Jones, Helen N, Redline, Raymond W, Rokas, Antonis, Muglia, Louis J

Journal:

Year:

2018

Language:

english

File:

PDF, 6.57 MB

english, 2018

11

Genome Sequence of the Mycotoxigenic Crop Pathogen Fusarium proliferatum Strain ITEM 2341 from Date Palm

Almiman, Bandar F., Shittu, Taiwo A., Muthumeenakshi, Sreenivasaprasad, Baroncelli, Riccardo, Sreenivasaprasad, Surapareddy, Rokas, Antonis

Journal:

Microbiology Resource Announcements

Year:

2018

Language:

english

File:

PDF, 133 KB

english, 2018

12

Reticulate evolution in eukaryotes: Origin and evolution of the nitrate assimilation pathway

Ocaña-Pallarès, Eduard, Najle, Sebastián R., Scazzocchio, Claudio, Ruiz-Trillo, Iñaki, Rokas, Antonis

Journal:

Year:

2019

Language:

english

File:

PDF, 8.69 MB

english, 2019

13

Unearthing fungal chemodiversity and prospects for drug discovery

Greco, Claudio, Keller, Nancy P, Rokas, Antonis

Journal:

Current Opinion in Microbiology

Year:

2019

Language:

english

File:

PDF, 1.14 MB

english, 2019

14

Orthogonal Method for Double-Bond Placement via Ozone-Induced Dissociation Mass Spectrometry (OzID-MS)

Knowles, Sonja L., Vu, Ngoc, Todd, Daniel A., Raja, Huzefa A., Rokas, Antonis, Zhang, Qibin, Oberlies, Nicholas H.

Journal:

Journal of Natural Products

Year:

2019

File:

PDF, 2.54 MB

2019

15

Draft Genome Sequence of the Strawberry Anthracnose Pathogen Colletotrichum fructicola

Armitage, Andrew D., Nellist, Charlotte F., Bates, Helen J., Zhang, Liqing, Zou, Xiaohua, Gao, Qing-Hua, Harrison, Richard J., Rokas, Antonis

Journal:

Microbiology Resource Announcements

Year:

2020

File:

PDF, 184 KB

2020

16

A Maximum-Likelihood Analysis of Eight Phylogenetic Markers in Gallwasps (Hymenoptera: Cynipidae): Implications for Insect Phylogenetic Studies

Antonis Rokas, Johan A.A Nylander, Fredrik Ronquist, Graham N Stone

Journal:

Molecular Phylogenetics and Evolution

Year:

2002

Language:

english

File:

PDF, 246 KB

english, 2002

17

Lifecycle closure, lineage sorting, and hybridization revealed in a phylogenetic analysis of European oak gallwasps (Hymenoptera: Cynipidae: Cynipini) using mitochondrial sequence data

Antonis Rokas, George Melika, Yoshihisa Abe, Jose-Luis Nieves-Aldrey, James M Cook, Graham N Stone

Journal:

Molecular Phylogenetics and Evolution

Year:

2003

Language:

english

File:

PDF, 315 KB

english, 2003

18

Understanding patterns of genetic diversity in the oak gallwasp Biorhiza pallida: demographic history or a Wolbachia selective sweep?

Antonis Rokas, Rachel J. Atkinson, Gordon S. Brown, Stuart A. West, Graham N. Stone

Journal:

Year:

2001

Language:

english

File:

PDF, 399 KB

english, 2001

19

Differential success in northwards range expansion between ecotypes of the marble gallwasp Andricuskollari: a tale of two lifecycles

Graham Stone, Rachel Atkinson, Antonis Rokas, György Csóka, José-Luis Nieves-Aldrey

Journal:

Molecular Ecology

Year:

2001

Language:

english

File:

PDF, 1.58 MB

english, 2001

20

Out of Anatolia: longitudinal gradients in genetic diversity support an eastern origin for a circum-Mediterranean oak gallwasp Andricus quercustozae

Antonis Rokas, Rachel J. Atkinson, Lucy Webster, György Csóka, Graham N. Stone

Journal:

Molecular Ecology

Year:

2003

Language:

english

File:

PDF, 565 KB

english, 2003

21

Conflicting phylogenetic signals at the base of the metazoan tree

Antonis Rokas, Nicole King, John Finnerty, Sean B. Carroll

Journal:

Evolution & Development

Year:

2003

Language:

english

File:

PDF, 467 KB

english, 2003

22

Transcriptome profiling of chemosensory appendages in the malaria vectorAnopheles gambiaereveals tissue- and sex-specific signatures of odor coding

R Jason Pitts, David C Rinker, Patrick L Jones, Antonis Rokas, Laurence J Zwiebel

Journal:

Year:

2011

Language:

english

File:

PDF, 2.81 MB

english, 2011

23

EVOLUTIONARY SHIFTS BETWEEN HOST OAK SECTIONS AND HOST-PLANT ORGANS IN ANDRICUS GALLWASPS

James M. Cook, Antonis Rokas, Mark Pagel, Graham N. Stone

Journal:

Year:

2002

Language:

english

File:

PDF, 179 KB

english, 2002

24

Longitudinal range expansion and cryptic eastern species in the western Palaearctic oak gallwasp, Andricus coriarius

RICHARD J. CHALLIS, SERAP MUTUN, JOSE-LUIS NIEVES-ALDREY, SONJA PREUSS, ANTONIS ROKAS, ALEXANDRE AEBI, EBRAHIM SADEGHI, MAJID TAVAKOLI, GRAHAM N. STONE

Journal:

Molecular Ecology

Year:

2007

Language:

english

File:

PDF, 256 KB

english, 2007

25

Evidence for widespread cryptic sexual generations in apparently purely asexual Andricus gallwasps

GRAHAM N. STONE, RACHEL J. ATKINSON, ANTONIS ROKAS, JOSÉ-LUIS NIEVES ALDREY, GEORGE MELIKA, ZOLTAN Ács, GYÖRGY CSÓKA, ALEXANDER HAYWARD, RICHARD BAILEY, CAROLINE BUCKEE, GILEAN A. T. McVEAN

Journal:

Molecular Ecology

Year:

2008

Language:

english

File:

PDF, 501 KB

english, 2008

26

Evidence for genetic differentiation and variable recombination rates among Dutch populations of the opportunistic human pathogen Aspergillus fumigatus

CORNÉ H. W. KLAASSEN, JOHN G. GIBBONS, NATALIE D. FEDOROVA, JACQUES F. MEIS, ANTONIS ROKAS

Journal:

Molecular Ecology

Year:

2012

Language:

english

File:

PDF, 829 KB

english, 2012

27

Evolution: Different paths to the same end

Journal:

Year:

2006

Language:

english

File:

PDF, 232 KB

english, 2006

28

Genome-scale approaches to resolving incongruence in molecular phylogenies

Rokas, Antonis, Williams, Barry L., King, Nicole, Carroll, Sean B.

Journal:

Year:

2003

Language:

english

File:

PDF, 686 KB

english, 2003

29

Repeated morphological evolution through cis-regulatory changes in a pleiotropic gene

Prud'homme, Benjamin, Gompel, Nicolas, Rokas, Antonis, Kassner, Victoria A., Williams, Thomas M., Yeh, Shu-Dan, True, John R., Carroll, Sean B.

Journal:

Year:

2006

Language:

english

File:

PDF, 428 KB

english, 2006

30

Horizontal Transfer of a Large and Highly Toxic Secondary Metabolic Gene Cluster between Fungi

Jason C. Slot, Antonis Rokas

Journal:

Current Biology

Year:

2011

Language:

english

File:

PDF, 3.86 MB

english, 2011

31

Transcriptional Rewiring: The Proof Is in the Eating

Antonis Rokas, Chris Todd Hittinger

Journal:

Current Biology

Year:

2007

Language:

english

File:

PDF, 119 KB

english, 2007

32

The effect of domestication on the fungal proteome

Journal:

Trends in Genetics

Year:

2009

Language:

english

File:

PDF, 183 KB

english, 2009

33

Influential passengers come of age: 1st International Wolbachia Conference, Orthodox Academy, Kolymbari, Crete, Greece, 7–12 June 2000

James M Cook, Antonis Rokas

Journal:

Trends in Genetics

Year:

2000

Language:

english

File:

PDF, 136 KB

english, 2000

34

Regulation of Body Pigmentation by the Abdominal-B Hox Protein and Its Gain and Loss in Drosophila Evolution

Sangyun Jeong, Antonis Rokas, Sean B. Carroll

Journal:

Year:

2006

Language:

english

File:

PDF, 1.07 MB

english, 2006

35

The molecular origins of multicellular transitions

Journal:

Current Opinion in Genetics & Development

Year:

2008

Language:

english

File:

PDF, 597 KB

english, 2008

36

What determines the direction of evolutionary change?: Biased Embryos and Evolution By Wallace Arthur. Cambridge University Press, 2004. £50.00/£18.95 hbk/pbk (252 pages) ISBN 0 52183 3825/0 52154 1611

Journal:

Trends in Ecology & Evolution

Year:

2004

Language:

english

File:

PDF, 129 KB

english, 2004

37

Harnessing genomics for evolutionary insights

Antonis Rokas, Patrick Abbot

Journal:

Trends in Ecology & Evolution

Year:

2009

Language:

english

File:

PDF, 843 KB

english, 2009

38

A Bayesian guide to tree felling

Antonis Rokas, Gilean McVean

Journal:

Trends in Ecology & Evolution

Year:

2000

Language:

english

File:

PDF, 107 KB

english, 2000

39

Evolutionary biology meets genomics

Journal:

Trends in Ecology & Evolution

Year:

2001

Language:

english

File:

PDF, 42 KB

english, 2001

40

Rare genomic changes as a tool for phylogenetics

Antonis Rokas, Peter W.H. Holland

Journal:

Trends in Ecology & Evolution

Year:

2000

Language:

english

File:

PDF, 377 KB

english, 2000

41

Selfish element wars in a wasp battleground

Journal:

Trends in Ecology & Evolution

Year:

2001

Language:

english

File:

PDF, 22 KB

english, 2001

42

Getting it right for the wrong reason

Journal:

Trends in Ecology & Evolution

Year:

2001

Language:

english

File:

PDF, 17 KB

english, 2001

43

What is a character?

Journal:

Trends in Ecology & Evolution

Year:

2001

Language:

english

File:

PDF, 26 KB

english, 2001

44

Sexual selection driving spider diversification

Journal:

Trends in Ecology & Evolution

Year:

2002

Language:

english

File:

PDF, 15 KB

english, 2002

45

Wolbachia as a speciation agent

Journal:

Trends in Ecology & Evolution

Year:

2000

Language:

english

File:

PDF, 61 KB

english, 2000

46

The ASP3 locus in Saccharomyces cerevisiae originated by horizontal gene transfer from Wickerhamomyces

Garrett P. League, Jason C. Slot, Antonis Rokas

Journal:

FEMS Yeast Research

Year:

2012

Language:

english

File:

PDF, 416 KB

english, 2012

47

Remarkably ancient balanced polymorphisms in a multi-locus gene network

Hittinger, Chris Todd, Gonçalves, Paula, Sampaio, José Paulo, Dover, Jim, Johnston, Mark, Rokas, Antonis

Journal:

Year:

2010

Language:

english

File:

PDF, 545 KB

english, 2010

48

The phylogeographical clade trade: tracing the impact of human-mediated dispersal on the colonization of northern Europe by the oak gallwasp Andricus kollari

GRAHAM N. STONE, RICHARD J. CHALLIS, RACHEL J. ATKINSON, GYÖRGY CSÓKA, ALEX HAYWARD, GEORGE MELIKA, SERAP MUTUN, SONJA PREUSS, ANTONIS ROKAS, EBRAHIM SADEGHI, KARSTEN SCHÖNROGGE

Journal:

Molecular Ecology

Year:

2007

Language:

english

File:

PDF, 686 KB

english, 2007

49

The Evolutionary Imprint of Domestication on Genome Variation and Function of the Filamentous Fungus Aspergillus oryzae

John G. Gibbons, Leonidas Salichos, Jason C. Slot, David C. Rinker, Kriston L. McGary, Jonas G. King, Maren A. Klich, David L. Tabb, W. Hayes McDonald, Antonis Rokas

Journal:

Current Biology

Year:

2012

Language:

english

File:

PDF, 1.26 MB

english, 2012

50

The function and evolution of the Aspergillus genome

John G. Gibbons, Antonis Rokas

Journal:

Trends in Microbiology

Year:

2013

Language:

english

File:

PDF, 428 KB

english, 2013